I would have to say it's still a mixed bag. The conservative resurgence (80's) was primarily aimed at denominational leadership and the Seminaries. So that did not necessarily bring back individual churches from moderate/liberal leanings. I do think there have been some churches that have since gotten new pastors, who were trained at these newly conservative seminaries, and so may have been brought back from that kind of thinking. However there are still many SBC churches that remain SBC, but just don't agree with the Mohlerites.
There are also likely many who have adopted seeker-driven philosophies of ministry, while still claiming adherence to fundamentals of the faith. Some have said that now that the battle for innerrancy has been fought in the SBC, we need to focus on the sufficiency of Scripture, since we don't seem to believe it works, and are trying to prop it up with other gimmicks.
As for right now, (and the following is total hearsay): It seems that Southern Seminary and Southeastern are the strongest, perhaps followed by Southwestern. I have not heard anything about Golden gate Seminary, but have heard negative things about New Orleans and Mid-western, that they are simply not very good. I think some of the colleges might be Ok, but I've heard iffy things about others.
I am personally at what I believe to be a fairly solid SBC church in southern Indiana, and the churches around this area that are SBC are for the most part theologically solid, even if some methods vary. This may be unusual, however, since we are in the radius of Southern Seminary in Louisville, and I know that people from southern (myself included) have a big influence on the churches in Louisville and surrounding areas.
As to Missouri, my pastor actually enrolled in a Doctor of Ministry Degree there, went out to the first one-week session of classes, and was so turned off by it that he left early, came home, withdrew his application...and ended up enrolling in SBTS instead. He says there is no comparison.